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1.B.27.1.8
Outer membrane porin, HopV, of 248 aas (Lienlaf et al. 2010).

Accession Number:A8BA89
Protein Name:HopV
Length:248
Molecular Weight:28140.00
Species:Helicobacter pylori [210]
Number of TMSs:3
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MVKRMILLGA LGVVASAEES AAFVGVNYQV SMIQNQTKMV NDNGLQKPLI KFPPYAGAGF 
61:	EAGYKQFFGK KKWFGMRYYG FFDYAHNRFG VMKKGIPVGE SGFIYNSFSF GGTTLTERDS 
121:	YQGQYYINLF TYGVGLDTLW NFVNKENMVF GFVVGIQLAG DSWATSISKE IAHYAKHHSD 
181:	SSYSPANFQF LWKFGVRTHI AKHNSLELGI KVPTITHRLF SITNEKGYTL QADVRRVYAF 
241:	QISYLRDF