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1.B.35.1.3
Alginate-oligosaccharide-specific porin, KdgM (Wargacki et al., 2012).

Accession Number:A3UR43
Protein Name:Putative oligogalacturonate specific porin
Length:286
Molecular Weight:32678.00
Species:Vibrio splendidus 12B01 [314291]
Number of TMSs:1
Substrate Alginate-oligosaccharides

Cross database links:

Pfam: PF06178   

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MNSVTKIAAA VACTLLAGTA AGASLDYRYE YRAATDYTKT NGDTAHVDAR HQHRVKLGES 
61:	FKLSDKWKHS TGLELKFHGD DSYYDEDSGS VKSANSQSFY DGNWYIYGME IDNTATYKID 
121:	NNWYLQMGMP IAWDWDEPNA NDGDWKMKKV TFKPQFRVGY KADMGLTTAI RYRHEYADFR 
181:	NHTQFGDKDS ETGERLESAQ KSKVTLTGSY KIESLPKLGL SYEANYVKSL DNVLLYNSDD 
241:	WEWDAGLKVN YKFGSWKPFA EIWSSDISSS SKDREAKYRV GIAYSF