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1.B.36.1.2
The BBA01 protein

Accession Number:O50896
Protein Name:BBA01 porin
Length:161
Molecular Weight:17887.00
Species:Borrelia burgdorferi (Lyme disease spirochete) [139]
Number of TMSs:4
Location1 / Topology2 / Orientation3: Plastid1 / Multi-pass membrane protein2
Substrate small molecules

Cross database links:

HEGENOM: HBG354601
RefSeq: NP_045674.1   
Entrez Gene ID: 1194323   
Pfam: PF05628   
BioCyc: BBUR224326:BB_A01-MONOMER   
KEGG: bbu:BBA01   

References (1)

[1] “Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi.”  Fraser C.M.et.al.   9403685

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MKKIFTLILI FGLTIQIFAT KDTQNRIEKG IESFNKYDKE KKNPIGPFLL NLFLPFGIGS 
61:	FVQGDYIGGG SVLGFNLLGA ILWGTGIILN HRETQLTGYI LIGVGASMVL TSYTVSLIIP 
121:	FTFANRHNEN LKKRLSAELA GFEPNFDLGI NGFQLSFKKS Y