TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.B.4.2.3
Putative porin

Accession Number:J2DEW0
Protein Name:Outer membrane autotransporter barrel domain-containing protein
Length:230
Molecular Weight:24277.00
Species:Rhizobium sp. AP16 [1144306]
Number of TMSs:1
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MHKVLGSAAF LFAFGMASAA YTADLSVSTP PAAPIEQPVF TWTGFYVGLN GGGAFGGDDK 
61:	FGLHSGDTFL GKFGKIEGSG FFGGGQIGYN YQVDPNWVIG LEADFQGANI HDSVTNDGAH 
121:	GSSKINWFGT LRPRVGYAYD NTLFYGTGGL AYGHIDYKGS LDGVGSFSED KTKAGWVLGA 
181:	GVEHAFTDNV TAKLEYQYVD FGSFTAGGDA LSSKATADFH SIRVGVNYKF