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1.B.51.1.1
Outer membrane-spanning porin, Oms66 (P66) (Skare et al., 1997).  This porin has a β-barrel structure (Kenedy et al. 2013) and pore diameters at the mouth of 1.6nm and at the central constriction of 0.8nm (Bárcena-Uribarri et al. 2013).

Accession Number:Q44881
Protein Name:Oms66
Length:618
Molecular Weight:68172.00
Species:Borrelia burgdorferi (Lyme disease spirochete) [139]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Secreted1
Substrate small molecules

Cross database links:

HEGENOM: HBG354459
RefSeq: NP_212737.1   
Entrez Gene ID: 1195450   
Pfam: PF11263   
BioCyc: BBUR224326:BB_0603-MONOMER   
KEGG: bbu:BB0603   

References (2)

[1] “Molecular analysis of a 66-kDa protein associated with the outer membrane of Lyme disease Borrelia.”  Bunikis J.et.al.   7557322
[2] “Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi.”  Fraser C.M.et.al.   9403685

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKSHILYKLI IFLTTSAAIF AADALKEKDI FKINPWMPTF GFENTSEFRL DMDELVPGFE 
61:	NKSKITIKLK PFEANPELGK DDPFSAYIKV EDLALKAEGK KGDQFKIDVG DITAQINMYD 
121:	FFIKISTMTD FDFNKESLFS FAPMTGFKST YYGFPSNDRA VRGTILARGT SKNIGTIQLG 
181:	YKLPKLDLTF AIGGTGTGNR NQENDKDTPY NKTYQGILYG IQATWKPIKN LLDQNEDTKS 
241:	VIAETPFELN FGLSGAYGNE TFNNSSITYS LKDKSVVGND LLSPTLSNSA ILASFGAKYK 
301:	LGLTKINDKN TYLILQMGTD FGIDPFASDF SIFGHISKAA NFKKETPSDP NKKAEIFDPN 
361:	GNALNFSKNT ELGIAFSTGA SIGFAWNKDT GEKESWAIKG SDSYSTRLFG EQDKKSGVAL 
421:	GISYGQNLYR SKDTEKRLKT ISENAFQSLN VEISSYEDNK KGIINGLGWI TSIGLYDILR 
481:	QKSVENYPTT ISSTTENNQT EQSSTSTKTT TPNLTFEDAM KLGLALYLDY AIPIASISTE 
541:	AYVVPYIGAY ILGPSNKLSS DATKIYLKTG LSLEKLIRFT TISLGWDSNN IIELANKNTN 
601:	NAAIGSAFLQ FKIAYSGS