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1.B.52.1.1
The outer membrane-spanning porin, Oms28 (Skare et al., 1996)

Accession Number:O50963
Protein Name:Oms28
Length:257
Molecular Weight:27948.00
Species:Borrelia burgdorferi (Lyme disease spirochete) [139]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Secreted1
Substrate small molecules

Cross database links:

HEGENOM: HBG037415
RefSeq: NP_045747.1   
Entrez Gene ID: 1194355   
Pfam: PF03532   
BioCyc: BBUR224326:BB_A74-MONOMER   
KEGG: bbu:BBA74   

References (1)

[1] “Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi.”  Fraser C.M.et.al.   9403685

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MTKIFSNLII NGLLFGFVSL NVFADSNNAN ILKPQSNVLE HSDQKDNKKL DQKDQVNQAL 
61:	DTINKVTEDV SSKLEGVRES SLELVESNDA GVVKKFVGSM SLMSDVAKGT VVASQEATIV 
121:	AKCSGMVAEG ANKVVEMSKK AVQETQKAVS VAGEATFLIE KQIMLNKSPN NKELELTKEE 
181:	FAKVEQVKET LMASERALDE TVQEAQKVLN MVNGLNPSNK DQVLAKKDVA KAISNVVKVA 
241:	QGARDLTKVM AISLYMR