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1.B.56.1.1
Outer membrane porin, Oms38 (slightly anion selective)

Accession Number:B5RLX6
Protein Name:Uncharacterized conserved protein
Length:358
Molecular Weight:40518.00
Species:Borrelia duttonii (strain Ly) [412419]
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate anions, small molecules

Cross database links:

HEGENOM: HBG354431
RefSeq: YP_002222068.1   
Entrez Gene ID: 6918496   
KEGG: bdu:BDU_412   

References (1)

[1] “The genome of Borrelia recurrentis, the agent of deadly louse-borne relapsing fever, is a degraded subset of tick-borne Borrelia duttonii.”  Lescot M.et.al.   18787695

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MLKKLLIILI FLQTVSTYSE EETKQKLETK ENSTTKENSE TKQNQTRYFY IDFQTAYYPP 
61:	HALGTSNSKF SPSFITPKFT STDPSKQIEP SSWGSAKLIS HFGGHKFIPL QNNFDSIFFK 
121:	NNGIDLDVNI GLSPILALSH AKIGITPIAF LNIYTESEFG IGWEAFGFKG IGVHLGNGKY 
181:	SSKPEFYYEF TTGGRLQFDL NSIIDGEWTH VITVVGNNMK LRYNPHAKNN QLWKYKADEG 
241:	KNINGTIINP YALLAYQMPM PLNLVGFLYE GQTYIGNARY VSTMQDKGWG SDFFYHNFSL 
301:	IAKIQVIENL TLDVLFKFST APSYTEDTVG LADITKKVST NNSYVYYDSI GLSLTYKI