TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.B.6.1.22
Constitutively expressed OmpA of 365 aas (Gao et al. 2015).

Accession Number:Q8EBH3
Protein Name:Outer membrane porin
Length:365
Molecular Weight:39565.00
Species:Shewanella oneidensis (strain MR-1) [211586]
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MMKNTLKVVL LTSMLPLAAS ASQELTPWYV GAGLGVNNYE HIATDNGDDN PYAWDIFAGY 
61:	MFNDYFGAEI GYRDLGSADW TTGGISNDAG VKGATLGLVG VWPLGNRWSL SAEAGAMYYT 
121:	LENSQHTGTT SSSYSSNDFA PYVGAGVGYN FTDNLKLQAK YRRYENLDDT DFNTIEADSN 
181:	YWGLELSYRF GTPAAAAPVA AAVVAAAPVD SDNDGVYDDK DECPATPATH KVDSVGCTLY 
241:	ENVKKQEDVG SIQFANDSAV VKKEYYKDIE RLANYMNKNP EFTVEIAGHA SNVGKPEYNM 
301:	VLSDKRADAV AKILVEKYGI SQSRVTSNGY GITKPLVAGN SKEAHAANRR IEAIVTTTEK 
361:	QPVLK