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1.B.6.1.23
OmpA of 354 aas with 1 N-terminal α-TMS, 10 putative β-TM Strands and a periplasmic C-terminal domain, probably a peptidoglycan-binding domain (Khalid et al. 2008).  Plays a role in virulence (pneumonia in pigs and ruminants) (Verma et al. 2016; Confer and Ayalew 2013) and has been used for vaccine development (Dabo et al. 2008).

Accession Number:H9C4P7
Protein Name:OmpA
Length:354
Molecular Weight:38280.00
Species:Pasteurella multocida [747]
Number of TMSs:1
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKRIIQMKKT AIALTIVALA VASVAQAAPQ PNTFYVGAKA GWASFHNGLN QIEYVSETSF 
61:	GSKRNSVTYG VFGGYQITDN FAVELGYDDF GRAKVRANSK TTAFDAAKHT NHGTHLSLKA 
121:	SYPLLDGLDV YARVGAALIR SDYKLYAPLI NKRLSPHFKI TQVSPVFAGG LEYAFIPELT 
181:	LRVEYQWVNN VGKFEYADGQ YADFRPDIGS VTAGLSYRFG QSVYVPEVVS KTFTLNTDVT 
241:	FGFDKADLKP AAQNVLDGIY GEIAQLKSAS VAVAGYTDRL GSDAYNLKLS QRRADTVANY 
301:	LVAKGVAQNA ISATGHGEAN PVTGNKCDSV KGRKALIACL ADDRRVEIAV KGNK