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1.B.6.1.5
The OmpA-OmpF porin (OOP) family member, GmpA (involved in acetic acid fermentation; under quorum sensing control) (Iida et al., 2008). (most similar to 1.B.6.1.4)

Accession Number:B3A000
Protein Name:Outer membrane protein
Length:405
Molecular Weight:43507.00
Species:Gluconacetobacter intermedius [66229]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Membrane1 / Single-pass type I membrane protein2
Substrate small molecules

Cross database links:

Pfam: PF00691   

Gene Ontology

GO:0009279 C:cell outer membrane

References (1)

[1] “An OmpA family protein, a target of the GinI/GinR quorum-sensing system in Gluconacetobacter intermedius, controls acetic acid fermentation.”  Iida A.et.al.   18487322

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MRLRAALLAT TLGAAPLGTA MATTITGPYV GIGGGYDLTQ TQHAHGFDRD TYESESGKIR 
61:	NDPAVNARNL YDAHSRERMQ HGDGWTGFAN FGWGFGNGLR AEIEGVYNWS ALTGYSAAYG 
121:	TGSHVSGRTN GSDRSYGGFV NVLYDIDLKR LFGIDVPVTP FVGVGAGYLW QNVNASTVVP 
181:	GGIRPGGTAT VSQDGTNGSF AYQGIVGAAY DIPGVQGLQM TTEYRMIGQV ESFAMGNINQ 
241:	RVNDPASDHN NLRYDHRFNH QFIVGVRYAF NHAPPPPPPA PTVVPPAPTA ARTYLVFFDW 
301:	DGAALTGRSR EIVAQAAQAS THVQTTRIEV NGYTDNSAAH PGPRGEQYNM GLSMRRADSV 
361:	KAELIRDGVP ASGIDIHGYG EAHPMVPTGP DTREPQNRRV EIILH