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1.B.6.5.6
Outer membrane protein, OmpA of 196 aas and 8 putative TMSs

Accession Number:B6EJP3
Protein Name:Outer membrane protein A
Length:196
Molecular Weight:20659.00
Species:Aliivibrio salmonicida (strain LFI1238) [316275]
Number of TMSs:1
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MKKPILLLAL LSACSYANAA ANDVSGVYLG GGFGTTDFDD DGGFGSANIN DNDSTFKLIG 
61:	GYQFNRIVAV EMQYTKYGDL KLTHYNSPIN GTVEHSSVSL AANVGYTFGS GWRPFAIAGL 
121:	GSIEQSGKAY GLSDSDSGTS FHYGAGVEYT PKTLGGLAFR VAYEGDLFVV DSGSNNIDDD 
181:	YAMTIGTLYA GATYKF