TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.B.6.6.8
Porin of 180 aas and 8 beta strands

Accession Number:D8PAJ2
Protein Name:Putative uncharacterized protein
Length:180
Molecular Weight:19592.00
Species:Candidatus Nitrospira defluvii [330214]
Number of TMSs:3
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MRRIRALLIG LTFLGIHWVA PTTAAEVQEP RWGFSTDLGL WSGTTNDTTF ALGFGLDYYM 
61:	DQNFSFGGMA LFTPVGDLTQ IGIAGVAKYH LRLNSGFNLV PFAGLGILHA DLNRGNGPTK 
121:	VDRNDTSHFI PLGMSLEYQV GPKIAFSTTL MVNLHHITLS APVPDDNTSV ALLFGIRWGP