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1.B.6.8.1
Porin of 224 aas and 8 beta strands, TtoA (Estrada Mallarino et al. 2015).  The crystal structure is known (3DZM) (Nesper et al. 2008). The 2.8 Å structure reveals a transmembrane 8 stranded β-barrel, an extracellular cation-binding region and an external 5-β stranded sheet (Brosig et al. 2009).

Accession Number:Q72JD8
Protein Name:Hypothetical conserved protein
Length:224
Molecular Weight:23729.00
Species:Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [262724]
Number of TMSs:1
Substrate small molecules

Cross database links:

Structure:
3DZM     

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MKKGLLAALA GFLTLAMAQK FSVEAGAGFY GGFGGQLAVV AEDLAPGLPL GVRLGVGFAT 
61:	SDALDDGYDL GGGTTWGDVK EAGKFSEWGQ NVTLSLDVLY KPSGLGLPVE VAPYFGVRYN 
121:	FFSGGYTDPE DNLTIKAQTI SSNQLGLGLG VRAAYPLMPN LSLVGDLGVD YYFQACFTRV 
181:	EEDDSGNKSQ SSVCPGDSGY EDVNKFVTQP EWVLKLRLGA AYRF