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1.B.65.1.1
Outer membrane porin/adhesin/invasin of 272 aas and 10 established beta strands, OpcA.  The crystal structure (PDB#2VDF) is known (Prince et al. 2002).

Accession Number:A1IRP7
Protein Name:Outer membrane protein
Length:272
Molecular Weight:29961.00
Species:Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) [122587]
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKKTVFTCAM IALTGTAAAA QELQTANEFT VHTDLSSISS TRAFLKEKHK AAKHIGVRAD 
61:	IPFDANQGIR LEAGFGRSKK NIINLETDEN KLGKTKNVKL PTGVPENRID LYTGYTYTQT 
121:	LSDSLNFRVG AGLGFESSKD SIKTTKHTLH SSRQSWLAKV HADLLSQLGN GWYINPWSEV 
181:	KFDLNSRYKL NTGVTNLKKD INQKTNGWGF GLGANIGKKL GESASIEAGP FYKQRTYKES 
241:	GEFSVTTKSG DVSLTIPKTS IREYGLRVGI KF