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1.B.66.1.2
Outer membrane protein of 404 aas.  TC BLAST give a score of e-5 with 1.B.71.1.6 and 0.003 with 1.B.1.1.15, suggesting that all three familes are members of Porin Superfamily I.

Accession Number:Q11NP8
Protein Name:Putative uncharacterized protein
Length:404
Molecular Weight:44080.00
Species:Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) [269798]
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKKFALVTLA SFMLSAFTSQ AQDSTKTGKL TISGYVDMYY QYNFNNPTRE VGLFQSTTAD 
61:	GDGVENLGRI FDVKNNTFSL GLAQTKFAYT TDRSEVVVDL TYGPNSLLGN FGNVIGGNDL 
121:	MIKQAYMSYM FTDKLNVTVG QFGTHIGYEL IDAPLNYNYS LSYLFGNGPF YHTGAKASYA 
181:	FSESFGIMAG VVNGWDAMYD FNGTKSAIAQ IYVAPTDGFN IYVNYIGGDE RNGLSFPTLA 
241:	ATATSAKTVS HLFDLTTTYQ LSDAFKLGLN AAYGFGSNLK IDATQDDGYA KGSWGGAALY 
301:	ADYRFSEFFG LGLRAEHFID KDGLRYISST FGQGCTVSEF TLTGDMKFMD GHFNLKPEFR 
361:	IDVANVNDDM GGTYKGYVSN PGNPDKAKAT NIQPTLGMAA IYAF