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1.B.66.1.3
Putative porin of 371 aas.  TC BLAST give a score of 0.002 with 1.B.12.5.2 and hits four repeats.

Accession Number:D6CN32
Protein Name:Putative porin
Length:371
Molecular Weight:38023.00
Species:Thiomonas sp. (strain 3As) [426114]
Number of TMSs:4
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MNKIAIAAAV AAVLASYAGA ASAQTTPAPA APAAPSLGAV LAATPGLSIT GYVYGTYDYF 
61:	DTSSTLLRAY DTKPNGFNAN GAAATVAYLP SSGFGGQVTV LGGNDAKALN GSNSFYLNNA 
121:	FVQYATGGLT LMGGKFGSLA GFEVTNPMGN ATVSRSILFW DMEPGSLTGV RASYAVSPAL 
181:	TLIGGVNNGW VSPQPSNTSK TIELGASGSP NSMFSYMADY YRGQSPLFGG STNGVLQLLD 
241:	LVGTFNVNSA LTLGANVDLL SKDDVPLASG GTGTGKSNGL ALYATYALTS EWGVATRGEY 
301:	VDDKDGMVSG TNGTANKLKE LTLAVNYTPM KNVKLSAEVR QDKSDTAIFT KKDGSPTTKQ 
361:	SSLELMAVYS F