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1.B.7.1.4
OmaA major-porin (Burdman et al., 2000).

Accession Number:Q9F9L3
Protein Name:Major outer membrane protein OmaA
Length:390
Molecular Weight:40869.00
Species:Azospirillum brasilense [192]
Number of TMSs:1
Substrate small molecules

Cross database links:

References (1)

[1] “Identification and characterization of the omaA gene encoding the major outer membrane protein of Azospirillum brasilense.”  Burdman S.et.al.   11092733

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MNRYLLAGCA AAALALGAGA ANAQAKFEVK VGGDAYFEGG YVNEDRDEGA RSVDFRNRFR 
61:	VIVTPTAKAD NGLEYGGRIR MRANSGAGNA RTMDADRGYI FAQGAFGQVQ MGVTNSFNDA 
121:	TYVTAPQDYL PLAIYDGVTA WIGQTSDIGG GLAGLNGSIL NQSLVVENNA TKIVYFSPRF 
181:	AGLQVGASYT PRNDDSHASV NRADLTPVTA TGRGFSTTFE DLVEVGANYS NTFGGVALKA 
241:	SAGYYWGNAA GTTTVGASVE DLNAWQVGAQ VGYAGFSLGG SYTDFGESGQ IQTATSDNEK 
301:	SRLWVVGAQY TAGPIVVGAN YKNGKDAGSL YTAGSRKLEV YEFGAGYTVA PGLTLQAQYD 
361:	YFKADSDLST AAADLDNDGH VVLLRTVLAF