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1.B.7.1.6
Outer membrane porin

Accession Number:Q5LMY2
Protein Name:Outer membrane porin
Length:337
Molecular Weight:35696.00
Species:Silicibacter pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) [246200]
Number of TMSs:1
Substrate small molecules

Cross database links:

HEGENOM: HOG000143840
Entrez Gene ID: 3195739   
KEGG: sil:SPO3430   

Gene Ontology

GO:0015288 F:porin activity

References (1)

[1] “Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment.”  Moran M.A.et.al.   15602564

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MKTEGNTMKK VLFATTALIA TASVAAADVR ISGYGRFGLD YNDANDRAVN GVSKTTITSR 
61:	LRLQFDMSAE TDAGVAFDAR FRAQAESRDN TPGGATFNGA RFGVSYQGFR VNVGNIIGAV 
121:	ENMPGTYLET RTAGIGIDGA SFYSHVGNVN NEFFNWDAYS SAGTGVNGIE AIYSTGGFTG 
181:	HLSYSTRNGA VASDRIGVML SYNFGDWTVA AAHQSSDAMW EDKTLVSVAW DGGQFGARVA 
241:	YADNDGISKF GIYGNMDIGA SSNILLFYTD EEAVSASDVL AGRGDNRDAV AGSNMNEGGS 
301:	YGIHYSYDLG GGASFEAGYR RASNDNDTFQ AGVYFSF