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1.B.70.1.7
Secreted porin family protein

Accession Number:Q088E4
Protein Name:Secreted porin family protein
Length:400
Molecular Weight:43746.00
Species:Shewanella frigidimarina (strain NCIMB 400) [318167]
Number of TMSs:1
Substrate small molecules

Cross database links:

eggNOG: NOG27331
Entrez Gene ID: 4278643   
Pfam: PF02530   
KEGG: sfr:Sfri_0510   

Gene Ontology

GO:0016020 C:membrane
GO:0015288 F:porin activity

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MNKLYARKPL VIAVAIAIPL MLGTASVNSA EFDIADTKVA VGGYAKFMLN YDTDGTITAP 
61:	FNGDLYSVYT TPIDGSANAE KSDLHMTARE SRLFIKTASE NKYGTLKTYV EGDFFADIDS 
121:	DGPTWSNSNG FRIRHAYGEM TMGKHVVLAG QTWSNFMDFA GIMPSMDFAT DPGTTFVRQP 
181:	QVRYQYNIGK GQYTSISLEN PTLGLTAAGP YTLVNNGSSE DVMPDIIAKY FYANSRVTFS 
241:	PRVVIRRFEL EGDDAFGYGL ALNTSLKFGD GHKAVLGLMY GDGIGRYAGL GFNAGAGINA 
301:	DGETDTLEYS SITGGVVFAL QQNMRLAIGA GYSEQDEKGL EDGILTEYAN KTAFSWHTNL 
361:	FWNITPDIEW AVGVTMGDVE NMADKEGDMT RFQTYVKYTF