TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.B.72.1.1
Outer membrane porin, PomS of 317 aas (Aistleitner et al. 2013).

Accession Number:Q6MB36
Protein Name:Putative uncharacterized protein
Length:317
Molecular Weight:36324.00
Species:Protochlamydia amoebophila (strain UWE25) [264201]
Number of TMSs:1
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MRKLITFLMT LLVGSSVSYA NADFGQLTFE VGYRHDDISW NQKAPSYNPN YKLHRKFKDL 
61:	DIVQIGLKGR TMLGYNFYGR ASVNWGWIVD GDYKRTFSTY KSPVIAGFGS EDFVVTDTRR 
121:	DVIDENFVYD LSIGVGYPFY FSDCTLALSP VVGYALDSQH ISVEQGGLGF DSTGAVNPNS 
181:	YGSYTHKFNS RWYGPFVGVD FNYRPYGETW NLYAEVEYHF ARFKGRYHDE LLSQHHIHRS 
241:	KHAHAWTFAL GADYDFSNDW TAGLCVKFQD WTASRRHGHH GHVSSNSSDE IINLSGNERT 
301:	SHKWNSYAIN LTFGKQF