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1.B.79.1.1
SpmT porin (N-terminus)-sphingomyelinase (external; C-terminus) of 490 aas and 8 putative transmembrane β-strands in a β-barrel.  Transports glucose and phosphocholine (Speer et al. 2015)

Accession Number:P9WKQ1
Protein Name:Uncharacterized protein Rv0888
Length:490
Molecular Weight:52034.00
Species:Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [83332]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate glucose, Phosphocholine

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MDYAKRIGQV GALAVVLGVG AAVTTHAIGS AAPTDPSSSS TDSPVDACSP LGGSASSLAA 
61:	IPGASVPQVG VRQVDPGSIP DDLLNALIDF LAAVRNGLVP IIENRTPVAN PQQVSVPEGG 
121:	TVGPVRFDAC DPDGNRMTFA VRERGAPGGP QHGIVTVDQR TASFIYTADP GFVGTDTFSV 
181:	NVSDDTSLHV HGLAGYLGPF HGHDDVATVT VFVGNTPTDT ISGDFSMLTY NIAGLPFPLS 
241:	SAILPRFFYT KEIGKRLNAY YVANVQEDFA YHQFLIKKSK MPSQTPPEPP TLLWPIGVPF 
301:	SDGLNTLSEF KVQRLDRQTW YECTSDNCLT LKGFTYSQMR LPGGDTVDVY NLHTNTGGGP 
361:	TTNANLAQVA NYIQQNSAGR AVIVTGDFNA RYSDDQSALL QFAQVNGLTD AWVQVEHGPT 
421:	TPPFAPTCMV GNECELLDKI FYRSGQGVTL QAVSYGNEAP KFFNSKGEPL SDHSPAVVGF 
481:	HYVADNVAVR