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1.B.9.2.4
Putative aromatic hydrocarbon degradation pathway porin, FadL homologue, with an N-terminal transmembrane α-helix and about 16 putative β-TMSs.

Accession Number:F2NY23
Protein Name:Membrane protein involved in aromatic hydrocarbon degradation
Length:434
Molecular Weight:47393.00
Species:Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091) [869209]
Number of TMSs:1
Substrate Aromatic hydrocarbons

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKKIALLAFA AGLGFAFAGG VDNKTNLNQG YMRNPSRNTE TLRPEAVFYN IGGTAFMNDG 
61:	LYFELGNQFV LKNYADKLDG QKFEDDENVY FYPNAEVVYK KDNWAAFFGF GVFGGGGTLD 
121:	YSDGTGLTSL ALKQGMASAV KAKVTAAVMA GKLPLAQSQA YAQKLLEQLS SHSLEVYSVQ 
181:	LGEILGASYK INDMVSVAAA GRFMHGEQNI TLKCDGLKSV NGGSSKIGYE SNGYGFGGIF 
241:	GVHIKPWNTL DVGIQYQTIT KLKYKYDDLT GAYASSFLNA DEGDNFKNDL PAVLNLGVGY 
301:	TFFDKLNASM SFNYYFNKQA TIESPIDRSE YDYDDSWEIA LGADYRLNEQ LSFGTGFSYG 
361:	KQGAKSDVNN VFSPVLDNFV IGAGVEYSPV KLVTISGSAM YCKYFSEDYK KAGYTMELSK 
421:	DVVMLALGVT VKPF