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1.C.1.1.4
Alveicin B (Wertz and Riley, 2004)

Accession Number:Q6WRW3
Protein Name:Alveicin B
Length:358
Molecular Weight:38183.00
Species:Hafnia alvei [569]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate ions

Cross database links:

RefSeq: YP_025360.1   
Entrez Gene ID: 2853218   
Pfam: PF01024   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0019835 P:cytolysis
GO:0050829 P:defense response to Gram-negative bacterium

References (1)

[1] “Chimeric nature of two plasmids of Hafnia alvei encoding the bacteriocins alveicins A and B.”  Wertz J.E.et.al.   14996789

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSGGDGKGHN SGAHDSGGSI NGTSGKGGPD SGGGYWDNHP HITITGGREV GQGGAGINWG 
61:	GGSGHGNGGG SVAIQEYNTS KYPNTGGFPP LGDASWLLNP PKWSVIEVKS ENSAWRSYIT 
121:	HVQGHVYKLT FDGTGKLIDT AYVNYEPSDD TRWSPLKSFK YNKGTAEKQV RDAINNEKEA 
181:	VKDAVKFTAD FYKEVFKVYG EKAEKLAKLL ADQAKGKKVR NVEDALKSYE KYKTNINKKI 
241:	NAKDREAIAK ALESMDVGKA AKNIAKFSKG LGWVGPAIDI TDWFTELYKA VETDNWRSFY 
301:	VKTETIAVGL AATHVAALAF SAVLGGPVGI LGYGLIMAGV GALVNETIVD EANKVIGL