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1.C.106.3.2
Uncharacterized protein of 978 aas and 4 - 6 TMSs.  May be a pore-forming toxin (Durand et al. 2014).

Accession Number:E6VA88
Protein Name:Uncharacterized protein
Length:978
Molecular Weight:104109.00
Species:Variovorax paradoxus (strain EPS) [595537]
Number of TMSs:4
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MASSSQCRRC DKNGLSILLV RPTAIAKDDA FASAGASKLL THDAVIQSLG LPRIEQSRYV 
61:	LRLLRQGGYV YVYYPIGRPQ KLRKSWEAYR VSAQGAMLPE GEFVFDKTEA ACSRKSTHPH 
121:	DLRTICIEEP EQVGTVWIGF SMNWWSDKIK ATVAKDPGAA GMVKVDLGSA TQPSGFKADA 
181:	ALIGQHVADY ALCDFTHANV ESATPFYPAK AGEAAAVSLA MVMRKQAEAS PSTKDKELVL 
241:	AIPDPAGLAA DLNGIRIAKD KALKEALANS TDARALASDA ALRGLEEAIR AVAAVRAQNE 
301:	ANGSTSESAW NKIKDSRYVT EGGYRWEPSS DGSKAADGSA NGQIIGPPDA RRERAIAARG 
361:	KKLGESDWAK IGSQLDEARR NQLVTRARNR VEEDGRKLEP YEADWLKAMK SISTLKYFEC 
421:	HFDEDEPNRV IAPVSPGEIY CSESSLVHLP QPLSSQRHYK EYLEHLLDKP ITDKQAIALR 
481:	AMFGNQKVVI EQVNGLLAGD ADRGNSDNMR DKTYDMLKGL FTLEGGKKYS WMTDAVAAFA 
541:	GGHQTALGAA AFLLLRGNPA QAATYLQKLP KLAVVHNTLL MAIETAVNGG EPNMAILVER 
601:	RVTAAQAVNR VAAAPQGQYS QRDRTAFNQN EKRVLVLELS DVNTESGAVT LRPGEAPRMR 
661:	GYAKGAPSTK AFEAVKERAK SLNAVVTTES AIERVQQYRK IEAANLVAEG RIDQRLGIGG 
721:	MIVQAIGLYQ ALPALFKEIN GPGGEKLRDA ALSVADGVSG FTGATADTLA GAHKAALMNQ 
781:	AAGKQLIQMS TKLAVLKTVA GLAGVAGGAL NAVMSAYKAQ GAKEEGDMLA YVGYTTAEAM 
841:	FVGTSFTSGF AAADAASSGA VSRLIARRVL LRAAGVVATD VLAASAAGVA AFVSGVGLVL 
901:	LIVGIGATVF AIVSTRTELQ RWAARSYFGN GEDDKPKFKT AAEEDTELAK ALGVAVVDEV 
961:	KGAALLERDL ATEAANYG