TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.C.24.1.9
Class IIa bacteriocin Bavaricin MN precursor

Accession Number:P80493
Protein Name:Bacteriocin bavaricin-MN
Length:42
Molecular Weight:4402.00
Species:Lactobacillus sakei [1599]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Secreted1
Substrate small molecules, electrolytes, water

Cross database links:

Pfam: PF01721   

Gene Ontology

GO:0005576 C:extracellular region
GO:0005102 F:receptor binding
GO:0019835 P:cytolysis
GO:0042742 P:defense response to bacterium

References (1)

[1] “Purification of the bacteriocin bavaricin MN and characterization of its mode of action against Listeria monocytogenes Scott A cells and lipid vesicles.”  Kaiser A.L.et.al.   8953724

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	TKYYGNGVYC NSKKCWVDWG QAAGGIGQTV VXGWLGGAIP GK