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1.C.36.3.5
IIITCP complex protein, CopB of 852aas; 4TMSs

Accession Number:F8KWQ0
Protein Name:Putative type III secretion translocator protein CopB
Length:852
Molecular Weight:90583.00
Species:Parachlamydia acanthamoebae (strain UV7) [765952]
Number of TMSs:4
Substrate proteins

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MNEFNISSQG QQTNWNVATN ETEGAKATVN VNQGAVIQDS LNQAEGTQTA KTYLQLPGAP 
61:	ALETPSGETV PFKQMTMSDA TKLMSTTTQT PEEALNNFIK GGLAEAVLSG ALSDTEAGQA 
121:	LAQYINPKAN PKAGTNPKVQ ATLKQVVAQA NQEAQQLTKQ TPDQASAKAA LTQQVQDQSN 
181:	TTFDSAFKAA VKQAVSQMGL PKEQADQLIA KTIFAHEHPE AVTRSPDDLA SQIEKQVGEQ 
241:	VKQEMGLPDD WQFTPETSNL DDKLATDYNS AYDAAISGDF SKIQSNPDLV KTLKNMSPQQ 
301:	LAQLKYAHYN PGTASQTGNL RDVNAQLESM ILGSLINEYG FPPGWKPAVD NSAQNATIKG 
361:	AYRAAFAQQV SNYAKSQTPP LTQDQIDQIM EAFDNPEVAS PQMKALIGQL QQSAISSIRD 
421:	AYGLPSDWTA PVGETENAML DPFSAQVGTN AINLGKEMIS QATTLALNLP NVPMKAEILD 
481:	FMKAISDALT KLQEQIYLIQ NQDASKAKEL GKAELDKQLN KLAEQKKQME DQRKSGKPGL 
541:	GIFNSIMKVL GPISTVFSVV IAVLTLGAGA GLIGVAVAAA AIAYTVADQA LTASGKQGVM 
601:	GYAMQALTAA IKAAIPGPPA LQMAMDMIIK TVAIVALTAL VMTANPMVGM TVGLQAIGQA 
661:	TMQSNVIQNL VKLMGGDEMA QQITAMVLVT VATVVASLAF MVVTFFLQAE LIPFQIAETV 
721:	AKVAKTLVET LTKMASLAEK ISDAILKIAR MQLLDIAQIA NQLLSNGLDA AHSAIEIRSQ 
781:	LQQAAKVLAK AELEADMQVL NAMIKLLRKI IDNLTAGMPA EAEAISEIGT LKTHIWQSQS 
841:	QITTNIANAG AA