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1.C.45.1.4
The antifungal lentil seed defensin, Lc-def (47aas plus of 27aa leader peptide) (Finkina et al., 2008)

Accession Number:B3F051
Protein Name:Defensin Lc-def
Length:74
Molecular Weight:8401.00
Species:Lens culinaris subsp. culinaris (Cultivated lentil) [362247]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Secreted1
Substrate small molecules

Cross database links:

Pfam: PF00304   

Gene Ontology

GO:0005576 C:extracellular region
GO:0050832 P:defense response to fungus
GO:0031640 P:killing of cells of another organism

References (1)

[1] “A novel defensin from the lentil Lens culinaris seeds.”  Finkina E.I.et.al.   18468512
Structure:
2LJ7     

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MEKKTVAALS FLFIVLFVAQ EIAVTEAKTC ENLSDSFKGP CIPDGNCNKH CKEKEHLLSG 
61:	RCRDDFRCWC TRNC