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1.C.55.1.1
VirE2 anion-selective channel

Accession Number:P0A3W8
Protein Name:Single-strand DNA-binding protein VIE2 aka VirE2
Length:533
Molecular Weight:60587.00
Species:Agrobacterium tumefaciens [358]
Location1 / Topology2 / Orientation3: Secreted1
Substrate DNA, anions

Cross database links:

RefSeq: NP_059819.1   
Entrez Gene ID: 1224338   
Pfam: PF07229   

Gene Ontology

GO:0005576 C:extracellular region
GO:0003677 F:DNA binding

References (4)

[1] “Characterization of the virE operon of the Agrobacterium Ti plasmid pTiA6.”  Winans S.C.et.al.   3547330
[2] “Genetic analysis of the virE operon of the Agrobacterium Ti plasmid pTiA6.”  McBride K.E.et.al.   2832362
[3] “Agrobacterium VirE2 protein mediates nuclear uptake of single-stranded DNA in plant cells.”  Zupan J.R.et.al.   8637884
[4] “Nuclear localization of Agrobacterium VirE2 protein in plant cells.”  Citovsky V.et.al.   1615325

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MDLSGNEKSR PWKKANVSSS TISDIQMTNG ENLESGSPTR TEVLSPRLDD GSVDSSSSLY 
61:	SGSEHGNQAE IQKELSALFS NMSLPGNDRR PDEYILVRQT GQDAFTGIAK GNLDHMPTKA 
121:	EFNACCRLYR DGAGNYYPPP LAFDKISVPA QLEETWGMME AKERNKLRFQ YKLDVWNHAH 
181:	ADMGITGTEI FYQTDKNIKL DRNYKLRPED RYVQTERYGR REIQKRYQHE LQAGSLLPDI 
241:	MIKTPKNDIH FVYRFAGDNY ANKQFSEFEH TVKRRYGGET EIKLKSKSGI MHDSKYLESW 
301:	ERGSADIRFA EFVGENRAHN RQFPTATVNM GQQPDGQGGL TRDRHVSVEF LMQSAPNSPW 
361:	AQALKKGELW DRVQLLARDG NRYLSPHRLE YSDPEHFTEL MNRVGLPASM GRQSHAASIK 
421:	FEKFDAQAAV IVINGPELRD IHDLSPENLQ NVSTKDVIVA DRNENGQRTG TYTSVAEYER 
481:	LQLRLPADAA GVLGEAADKY SRDFVRPEPA SRPISDSRRI YESRPRSQSV NSF