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1.C.65.1.1
The plant host cell membrane pore-forming protein of type III protein secretion systems, HrpF

Accession Number:O33967
Protein Name:HrpF
Length:806
Molecular Weight:86421.00
Species:Xanthomonas campestris (pv. vesicatoria) [456327]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate proteins

Cross database links:

Pfam: PF05819   

Gene Ontology

GO:0009877 P:nodulation

References (1)

[1] “Two novel type III-secreted proteins of Xanthomonas campestris pv. vesicatoria are encoded within the hrp pathogenicity island.”  Noel L.et.al.   11844763

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MSLNTLSTGS NPSQLLGTSF NESSSSELLG SDSSKDGSDL PSTMDNIFQR IYLLLEALQA 
61:	NTPNSASGNA PANTASGDAD TQLSASDWQA TQPIEKRTSW PSLGYDFDPK HIKGKDAPPA 
121:	LEGSTVTWND GTLTKSELQI VSTLNAHKDQ MPLEYKNLDD KINDPSTPAD LKAALQGLKQ 
181:	DPRLFFAIGS QGDGKCGGKI SAQDLWDFSD SHPQVKELGG KNDEFNPKNI KGSNPPPAAE 
241:	GSTVTWNEGQ LNQSELEIVS VLDRHKDQVD SLSFDQLDAK INDPSTQPDL KKALQGLQKD 
301:	PRLFFAIGSQ KDGKCGGKIK AQDLTDFSYY HPQIAEYNDK QAKSYTQNYI ASDSPDKTKA 
361:	SVMTKSDALR ELYRYSDYLP GNLSEDEFAK IVDGDSKTGK CPPQVIAAAQ YFRDHPDEWK 
421:	EFAGDSGSMS TPDFLQKSTS EMHLTADEQK TLDTINSHQD AFYGDGKEIT RDKLDAISKD 
481:	DKADPAVKQA ATQLLADPLL FGLLNNSITG YKKPHHFFGG GHVVDSGKIS QDDFRQFYDH 
541:	MSAANKTVDT PATHEASSPD QQKAVADMLV GKDDPPAIKK PKKDVGTFQQ GLHEFLKWDS 
601:	KILDWMSVGL SALNGIPIIG EIADAASIAL ESEAQAAQVV DTAIQGGDMS LALKLAGINM 
661:	AGAVVGAVGG PTARIGAKGV AKGVAEAAAK EAAEGAAKGA AKGTAKSVAK GGGKTAAERP 
721:	SAAEFAKGYV GGTAISKSTE ILKTPVLAGL HYEEYQLDKQ KDGEIHQKME NAGGVPVGKQ 
781:	IIPKGIADNF EGDLRQNLRN VRIRRR