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1.C.65.1.2
The plant host membrane pore-forming translocator of type III secretion systems, PopF1 (Meyer et al., 2006)

Accession Number:Q8XPT2
Protein Name:Secreted protein PopF1
Length:726
Molecular Weight:77285.00
Species:Ralstonia solanacearum (Pseudomonas solanacearum) [305]
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate proteins

Cross database links:

HEGENOM: HBG752601
RefSeq: NP_523114.1   
Entrez Gene ID: 1223867   
Pfam: PF05819   
BioCyc: RSOL267608:RSP1555-MONOMER   
KEGG: rso:RSp1555   

Gene Ontology

GO:0009877 P:nodulation

References (1)

[1] “Genome sequence of the plant pathogen Ralstonia solanacearum.”  Salanoubat M.et.al.   11823852

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSTNISSAAS PTLPLAGPGV NGPAEGKSDM PGSLFFQFDH STGSTRPDLP TDLFFSFGDS 
61:	ISRAVQDASN QSPEQAPAAD PAPASPDGQS CQPSQPATPP VGSDVTWNGG TLNDTQLQII 
121:	GILNLHKDKG DISWDKLQDK INDPDTPPDL KWALQALSQD FNLFQAIGSQ GDGRFGGKIK 
181:	GKDLAEFAKS HSQVLTWNSG TLNDSQLEIM SILARHKDKM PVDWSSIQDK INDPSTPSDL 
241:	KAALQALAND PALFFAIGSQ GDGNCKGKIK AGDVSKFADN HPQVEEYNRK KAEGYVKNYI 
301:	PSDAKPGDKP SAMTQNDALR ELYRYSDYLP KKLDMEAFQR IVDGDSDVKK APPQVIAAAE 
361:	YFLQNRNEWA SLNKMDDPDK RVGKSDFLQR AASAVHLSKE DLQTVSTINS NLDVFFKDGQ 
421:	KITRDRLAAM SQDESLSPAV RNAAKQLLQD PLLYGLINNA NSGYKTKNGF FSFGGPTVDS 
481:	GVIGKKDFEK FMSSMTDANK TVQARKTHPA NSEASKSAVA DMGMGMEDQP DIKAVKKSGG 
541:	ALKKAMDKIL TIYSKVMDIA SQVVGALGVI PGLGEIADAL SMGMAAGASA AKVLSTLLNG 
601:	GSLKKALAEA GINLASAALG AVAGPEARVA LKNGLTKMLV EKVANTGIDL AVDKAKSFVD 
661:	GYLQDLKGRL QATAANAANT VNTSVNWVSD KTKDFLENPV QNLTPRVNIP GITPYQPGYP 
721:	MVAAAA