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1.C.65.1.3
The plant host membrane pore-forming translocater of type III secretion systems, PopF2 (Meyer et al., 2006)

Accession Number:Q8XRF4
Protein Name:Secreted protein PopF2
Length:736
Molecular Weight:78086.00
Species:Ralstonia solanacearum (Pseudomonas solanacearum) [305]
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate proteins

Cross database links:

HEGENOM: HBG752601
RefSeq: NP_522461.1   
Entrez Gene ID: 1223207   
Pfam: PF05819   
BioCyc: RSOL267608:RSP0900-MONOMER   
KEGG: rso:RSp0900   

Gene Ontology

GO:0009877 P:nodulation

References (1)

[1] “Genome sequence of the plant pathogen Ralstonia solanacearum.”  Salanoubat M.et.al.   11823852

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSTNISGAAS PTLPSAGAGA NGPVANPPDL PSSLLFQFDH PTGPSRPDLP PELFFKLDES 
61:	IARAMQGAAQ QSPDPSAGPE SQGNQPAPVD AAPPQESRPA DPPLGSDVTE TGGTPSPLQL 
121:	QILGTLSLYL NARGLPFGER VMTRQSLERA ANNADAPADL RAAAQAMLSD PALYQAIGGN 
181:	DGKFARKDID KFAKSHPQVL TRNSGTLTDS QLEIMSILAR HKDQLPVGWQ SIQDKINDPS 
241:	TPPDLKAALQ VLANDPALFS ALGSPGKGHK HKASGDYRIT AGDVSRFIDK HPQVEEYNRK 
301:	KAEGYVKNYI PSDAKPGDKP SAMTQNDALR ELYRYSDYLP KKLDMEAFQR IVDGDSDVKK 
361:	APPQVIAAAE YFLQNRNEWA SLNKMDDPDK RVGKSDFLQR AASAVHLSKE DLQTVSTINS 
421:	NLDVFFKDGQ KITRDRLAAM SQDESLSPAV RNAAKQLLQD PLLYGLINNA NSGYKTKNGF 
481:	FSFGGPTVDS GVIGKKDFEK FMSSMTDANK TVQARKTHPA NSEASKSAVA DMGMGMEDQP 
541:	DIKAVKKSGG ALKKAMDKIL TIYSKVMDIA SQVVGALGMI PGLGEIADAL SMGMAAGASA 
601:	AKVLSTLLNG GSLKKALAEA GINLASAALG AVAGPEARVA LKNGLTKMLV EKVANTGIDL 
661:	AVDKAKSFVD GYLQDLKGRL HATAANAVNT VNTGVNWVSD KTKDFLENPV QNLTPRVNIP 
721:	GITPYQPGYP VVAPAA