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1.C.65.2.1
The putative type III translocator, HrpK

Accession Number:Q9L6W3
Protein Name:HrpK aka Type III helper protein HrpK1
Length:780
Molecular Weight:80980.00
Species:Pseudomonas syringae (pv. tomato) [323]
Number of TMSs:2
Location1 / Topology2 / Orientation3: Cell outer membrane1
Substrate proteins

Cross database links:

HEGENOM: HBG193026
RefSeq: NP_791232.1   
Entrez Gene ID: 1183041   
BioCyc: PSYR223283:PSPTO_1405-MONOMER   
KEGG: pst:PSPTO_1405   

References (3)

[1] “The Pseudomonas syringae Hrp pathogenicity island has a tripartite mosaic structure composed of a cluster of type III secretion genes bounded by exchangeable effector and conserved effector loci that contribute to parasitic fitness and pathogenicity in plants.”  Alfano J.R.et.al.   10781092
[2] “A Pseudomonas syringae pv. tomato DC3000 Hrp (type III secretion) deletion mutant expressing the Hrp system of bean pathogen P. syringae pv. syringae 61 retains normal host specificity for tomato.”  Fouts D.E.et.al.   12580281
[3] “The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000.”  Buell C.R.et.al.   12928499

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MRISSSPFVI VNQPTPGELA LAVESPLAKA LPTPVGGGGQ AGVQFGQPAG NTQGAPTGAE 
61:	QTASSILALL LQGSGGAAAN ANVNNQVQPQ PCADSPAEAA PTEATAPAAP VEQVAAPTNT 
121:	DATDASNAPK AADAAFLDNS EYSSPEALKR WEPMVAHLPP EEREQAAKEL NRPIAAAWMA 
181:	RDDGPDAGKA MDFINANPAL KTAVDVAQGG GNADGKITNK DLKTFAKNME KAADSADKDL 
241:	ANYTKDNPDA DPQSLEMVRS AAVMRANMPL AIAADPHHAV DAADKTKVDG NVDAEDLKGL 
301:	AQSNPGLSGA LKQSCSTWSQ PGFLGQVDEA GMSGRKKAAH SPDKMFDAKN LSEWIKKSAP 
361:	TNGGQFASML SDSATLNAVA GIDISKLDKD VFDKPKSYSG AQKAAVMVKL QQTQQSVIAG 
421:	RSLRNTDKTE QGLNDRISQL QADPDVQAYL NKSIPEQERN LVRSDASLQK AVVEQTKNVN 
481:	SGQALQTDMD KADKAVNKHN PNADYSGAIS GLSAQLQLQK DLFPDSKVPT TNQVLENKPD 
541:	LQDKIATSYV TNFSEGGALK QLLGQKKSDA SQSLQTADNQ KAIYDSVLPP DFTENQHENY 
601:	MNSTLGTLQD SKKGRKLLEG KSDEGGPSML TQLAEAGVGG KALNSIVGFA SVSSLIAHGD 
661:	KLGATQAIYD STRMGAEAIK GGIDAGAKMM GREASAGLGR LGGQMIGRAV GMVAGEATGL 
721:	AAGAALGAAI PVVGWAIDGA LAVGFGISMI IDAVKKHKAQ KAFDHNVDPV LDQFGIAKAH