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1.C.83.1.1
Cyclic bacteriocin, Group II, Gassericin A (GaaA; 91 aas; 2 TMSs) (van Belkum et al., 2011)

Accession Number:O24790
Protein Name:Gassericin
Length:91
Molecular Weight:9286.00
Species:Lactobacillus gasseri [1596]
Number of TMSs:2
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate small molecules

Cross database links:

RefSeq: YP_002474143.1   
Entrez Gene ID: 7265972   
Pfam: PF12173   

References (2)

[1] “Sequence analysis by cloning of the structural gene of gassericin A, a hydrophobic bacteriocin produced by Lactobacillus gasseri LA39.”  Kawai Y.et.al.   9648219
[2] “Conjugative plasmid from Lactobacillus gasseri LA39 that carries genes for production of and immunity to the circular bacteriocin gassericin A.”  Ito Y.et.al.   19666732

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MVTKYGRNLG LNKVELFAIW AVLVVALLLT TANIYWIADQ FGIHLATGTA RKLLDAMASG 
61:	ASLGTAFAAI LGVTLPAWAL AAAGALGATA A