TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.E.10.1.3
Holin HolSMP (Orf43) (Shi et al. 2012).

Accession Number:A1EAB5
Protein Name:Putative holin
Length:142
Molecular Weight:15737.00
Species:Streptococcus phage SMP [413066]
Number of TMSs:3
Substrate endolysin

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MVMMLSKMPP HPHGMFDFLR ALIATEDGLV LFLLGLIVTM EIVDFLSGTF AAMINPDIEY 
61:	KSKIGINGLI RKMMGIILLT VLIPMSVLLP EQTGVAFLYT IYVGYLILTF KSLVENYGKA 
121:	KGDTSIFENV TAAFEKLIGK NK