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1.E.11.1.1
Holin 145 (Bon et al. 1997)

Accession Number:Q38020
Protein Name:Holin
Length:145
Molecular Weight:15665.00
Species:Bacteriophage phi-11, bacteriophage 80 alpha [12360]
Number of TMSs:2
Location1 / Topology2 / Orientation3: Host membrane1 / Single-pass membrane protein2
Substrate endolysin

Cross database links:

Pfam: PF04531   

References (1)

[1] “Sequence analysis of the region upstream of a peptidoglycan hydrolase-encoding gene from bacteriophage phi 11 of Staphylococcus aureus.”  Weerakoon L.K.et.al.   8566718

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MDINWKLRFK NKAVLTGLVG ALFVFIKQVT DLFGLDLSTQ LNQASAIIGA ILTLLTGIGV 
61:	ITDPTSKGVS DSSIAQTYQA PRDSKKEEQQ VTWKSSQDSS LTPELSAKAP KEYDTSQPFT 
121:	DASNDVGFDV NEYHHGGGDN ASKIN