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1.E.14.1.8
4 TMS holin protein 

Accession Number:D2EIF4
Protein Name:Holin protein
Length:136
Molecular Weight:15090.00
Species:Pediococcus acidilactici 7_4 [563194]
Number of TMSs:4
Substrate endolysin

Cross database links:

Pfam: PF03788   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MKKDQEKKKT PILVQMAIFA AILFVSQIIS QLFPANIVVP TPLIGMIILY ILLATHIVKL 
61:	EQVEKFGDFM IGLIAFLFVP SGIQLAGSLD LMKREGLQDI IVVVISIIIL LVVIAYVGAF 
121:	FIRIHQKITG KKGDDE