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1.E.18.1.1
The L. lactis phage r1t holin, Orf49

Accession Number:Q38134
Protein Name:HOLI aka Orf49
Length:75
Molecular Weight:7688.00
Species:Bacteriophage r1t [43685]
Number of TMSs:2
Location1 / Topology2 / Orientation3: Host membrane1 / Multi-pass membrane protein2
Substrate endolysin

Cross database links:

RefSeq: NP_695076.1   
Entrez Gene ID: 955473   

Gene Ontology

GO:0033644 C:host cell membrane
GO:0016021 C:integral to membrane
GO:0016998 P:cell wall macromolecule catabolic process
GO:0019835 P:cytolysis

References (1)

[1] “Sequence analysis and molecular characterization of the temperate lactococcal bacteriophage r1t.”  van Sinderen D.et.al.   8730875

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MKTFFKDMAE RAIKTFAQAM IGALGAGATG LIGVDWLQAL SIAGFATVVS ILTSLASGIP 
61:	GDNTASLVNN KKEGE