TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.E.2.1.11
Holin (N-terminal 100 aas) fused to a D-alanyl-D-alanine carboxypeptidase (C-terminal 138 aas).  The protein is 238 aas in length with 3 N-terminal TMSs.

Accession Number:D4E385
Protein Name:Phage holin, lambda family
Length:238
Molecular Weight:26508.00
Species:Serratia odorifera DSM 4582 [667129]
Number of TMSs:3
Substrate endolysin

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MSSLEPDGVS LFILHVCEYL QPAMNAILAG SMALLQGAYK NVAVRRRLLN AGMCALLAWT 
61:	VRDALSLVGW ELQWANIASV LIGFLGADYI SGLIKKLIGK KRGLKMLSEA QPTRFSVRSE 
121:	QRLQDVHADL IRVMRLALNY SLVPFAITEG RRNIERQREL VRTGKSQTLN SRHLTGHAVD 
181:	VVAMPAGVVS WQWDYYAQIA VAVRRAAREL GIQVEWGGAW QSLRDGPHFQ LAVKDYPA