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1.E.4.1.1
LydA protein

Accession Number:Q47424
Protein Name:LydA
Length:109
Molecular Weight:11466.00
Species:Escherichia coli [562]
Number of TMSs:3
Location1 / Topology2 / Orientation3: Host cell inner membrane1 / Multi-pass membrane protein2
Substrate endolysin

Cross database links:

References (2)

[1] “The Min DNA inversion enzyme of plasmid p15B of Escherichia coli 15T : a new member of the DIN family of site-specific recombinases.”  Lida S.et.al.   2215218
[2] “Gene organization in the multiple DNA inversion region min of plasmid p15B of E.coli 15T-: assemblage of a variable gene.”  Sandmeier H.et.al.   1945872

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MLDTQELAPV AIALLLSVIG GIGTFLMDVR DGRQSGNLLG LVTEIFVAVT AGAVAYLLGQ 
61:	HEGWELSITY LMVTIASNNG HEVISGMKRV NIDSILNVLT SLVKKGGGK