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1.G.18.1.2
The Coronavirus spike glycoprotein (S-glycoprotein; spike S2 protein of E2peplomer protein of 1363 aas.  The fusion peptide isN-terminal and of 19 aas (Apellániz et al. 2014).  It is a class I fusion protein.

Accession Number:P25190
Protein Name:Spike glycoprotein
Length:1363
Molecular Weight:150747.00
Species:Bovine coronavirus (strain F15) (BCoV) [11129]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Virion membrane1 / Peripheral membrane protein2
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MFLILLISLP MALAVIGDLK CTTVSINDVD TGVPSISTDT VDVTNGLGTY YVLDRVYLNT 
61:	TLLLNGYYPT SGSTYRNMAL KGTLLLSTLW FKPPFLSDFI NGIFAKVKNT KVIKHGVMYS 
121:	EFPAITIGST FVNTSYSVVV QPHTTNLDNK LQGLLEISVC QYTMCEYPNT ICHPNLGNRR 
181:	VELWHWDTGV VSCLYKRNFT YDVNADYLYF HFYQEGGTFY AYFTDTGVVT KFLFNVYLGT 
241:	VLSHYYVMPL TCNSAMTLEY WVTPLTSKQY LLAFNQDGVI FNAVDCKSDF MSEIKCKTLS 
301:	IAPSTGVYEL NGYTVQPIAD VYRRIPNLPD CNIEAWLNDK SVPSPLNWER KTFSNCNFNM 
361:	SSLMSFIQAD SFTCNNIDAA KIYGMCFSSI TIDKFAIPNG RKVDLQLGNL GYLQSFNYRI 
421:	DTTATSCQLY YNLPAANVSL SRFNPSIWNR RFGFTEQSVF KPQPVGVFTD HDVVYAQHCF 
481:	KAPTNFCPCK LDGSLCVGNG PGIDAGYKNS GIGTCPAGTN YLTCHNAAQC NCLCTPDPIT 
541:	SKSTGPYKCP QTKYLVGIGE HCSGLAIKSD YCGGNPCTCQ PQAFLGWSVD SCLQGDRCNI 
601:	FANFILHDVN SGTTCSTDLQ KSNTDIILGV CVNYDLYGIT GQGIFVEANA TYYNSWQNLL 
661:	YDSNGNLYGF RDYLTNRTFM IRSCYSGRVS AAFHANSSEP ALLFRNIKCN YVFNNTLSRQ 
721:	LQPINYFDSY LGCVVNADNS TASAVQTCDL TVGSGYCVDY STKRRSVRAI TTGYRFTNFE 
781:	PFTVNSVNDS LEPVGGLYEI QIPSEFTIGN MEEFIQTSSP KVTIDCSAFV CGDCAACKSQ 
841:	LVEYGSFCDN INAILTEVNE LLDTTQLQVA NSLMNGVTLS TKLKDGVNFN VDDINFSPVL 
901:	GCLGSECNKV SSRSAIEDLL FSKVKLSDVG FVEAYNNCTG GAEIRDLICV QSYNGIKVLP 
961:	PLLSENQISG YTLAATSASL FPPWSAAAGV PFYLNVQYRI NGIGVTMDVL SQNQKLIANA 
1021:	FNNALDAIQE GFDATNSALV KIQAVVNANA EALNNLLQQL SNRFGAISSS LQEILSRLDA 
1081:	LEAQRQIDRL INGRFTALNA YVSQQLSDST LVKFSAAQAM EKVNECVKSQ SSRINFCGNG 
1141:	NHIISLVQNA PYGLYFIHFS YVPTKYVTAK VSPGLCIAGD RGIAPKSGYF VNVNNTWMFT 
1201:	GSGYYYPEPI TGNNVVVMST CAVNYTKAPD VMLNISTPNL PDFKEELDQW FKNQTSVAPD 
1261:	LSLDYINVTF LDLQDEMNRL QEAIKLLNQS YINLKDIGTY EYYVKWPWYV WLLIGFAGVA 
1321:	MLVLLFFICC CTGCGTSCFK KCGGCCDDYT GHQELVIKTS HDD