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1.G.3.1.3
Polyprotein of 3432 aas of the Flavi-glycoprotein family.  The type II fusion peptide is residues 392 - 407 (Apellániz et al. 2014).

Accession Number:Q9WCX6
Protein Name:Polyprotein
Length:3432
Molecular Weight:380175.00
Species:Japanese encephalitis virus [11072]
Number of TMSs:23
Location1 / Topology2 / Orientation3: Virion membrane1 / Multi-pass membrane protein2
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MTKKPGGPGK NRAINMLKRG LPRVFPLVGV KRVVMSLLDG RGPVRFVLAL ITFFKFTALA 
61:	PTKALLGRWK AVEKSVAMKH LTSFKRELGT LIDAVNKRGR KQNKRGGNEG SIMWLASLAV 
121:	VIACAGAMKL SNFQGKLLMT INNTDIADVI VIPTSKGENR CWVRAIDVGY MCEDTITYEC 
181:	PKLAMGNDPE DVDCWCDNQE VYVQYGRCTR TRHSKRSRRS VSVQTHGESS LVNKKEAWLD 
241:	STKATRYLMK TENWIIRNPG YAFLAAVLGW MLGSNNGQRL GFTILLLLVA PAYSFNCLGM 
301:	GNRDFIQGAS GATWVDLVLE GDSCLTIMAN DKPTLDVRMI NIEASQLAEV RSYCYHASVT 
361:	DISTVARCPT TGEAHNEKRA DSSYVCKQGF TDRGWRNGCG LFGKGSIDTC AKFSCTSKAI 
421:	ERTIQPENIK YEVGIFVHGT TTSENHGNYS AQVGASQAAK FTVTPNAPSI TLKLGDYGEV 
481:	TLDCEPRSGL NTEAFYVMTV GSKSFLVHRE WFHDLALPWS SPSSTAWRNR ELLMEFEEAH 
541:	ATKQSVVALG SQEGGLHQAL AGAIVVEYSS SVKLTSGHLK CRLKMDKLAL KGTTYGMCTE 
601:	KFSFAKNPAD TGHGTVVIEL SYSGSDGPCK IPIVSVASLN DMTPVGRLVT VNPFVATSSA 
661:	NSKVLVEMEP PFGDSYIVVG RGDKQINHHW HKAGSTLGKA FSTTLKGAQR LAALGDTAWD 
721:	FGSIGGVFNS IGKAVHQVFG GAFRTLFGGM SWITQGLMGA LLLWMGVNAR DRSIALAFLA 
781:	TGGVLVFLAT NVHADTGCAI DITRKEMRCG SGIFVHNDVE AWVDRYKYLP ETPRSLAKIV 
841:	HKAHKEGVCG VRSVTRLEHQ MWEAVRDELN VLLKENAVDL XVVVNKPVGR YRSTPKRLSM 
901:	TQEKFEMGWK AWGKSILFAP ELANSTFVVD GPETKECPVV HRAWNSMQIE DFGFGITSTR 
961:	VWLKIREEST DECDGAIIGT AVKGHVAVHS DLSYWIESRY NDTWKLERAV FGEVKSCTWP 
1021:	ETHTLWGDGV EESELIIPDT IAGPKSKHNR REGYRTQNQG PWDENGIVLD FDYCPGTKVT 
1081:	ITEDCGKRGP SVRTTTDSGK LITDWCCRSC SLPPLGFRTE NGCWYGMEIR PVRHDETTLV 
1141:	RSQVDAFNGE MVDPFQMGLL VMFLATQEVL GKRWTARLTI PAVLGALLVL MLGGITYTDL 
1201:	ARYVVLVAAA FAEANSGGDV LHLALIAVFK IQPAFLVMNM LSTRWTNQEN VALVLGAAFF 
1261:	QLASVDLQIG VHGILNAAAI AWMIVRAITF PTTSSVTMPV LALLTPGMRA LYLDTYRIIL 
1321:	LVIGICSLLQ ERKKAMAKKK GAVLLGLALT STGWFSPTTI AAGLMVCNPN KKRGWPATEF 
1381:	LSAVGLMFAI VGGLAELDIE SMSIPFMLAG LMAVSYVVSG KATDMWLERA ADISWEMDAA 
1441:	ITGSSRRLDV KLDDDGDFHL IDDPGVPWKV WVLRMSCICL AALTPWAIVP AAFGYWLTLK 
1501:	TTKRGGVFWD TPSPKPCSKG DTTTGVYRIM ARGILGTYQA GVGVMYENVF HTLWHTTRGA 
1561:	AIMSGEGKLT PYWGSVREDR IAYGGPWRFD RKWNGTDDVQ VIVVEPGKAA VNIQTKPGVF 
1621:	RTPFGEVGAV SLDYPRGTSG SPILDSNGDI IGLYGNGVEL GDGSYVSAIV QGDRQEEPVP 
1681:	EAYTPNMLRK RQMTVLDLHP GSGKTRKILP QIIKDAIQQR LRTAVLAPTR VVAAEMAEAL 
1741:	RGLPVRYQTS AVQREHQGNE IVDVMCHATL THRLMSPNRV PNYNLFVMDE AHFTDPASIA 
1801:	ARGYIATKVE LGEAAAIFMT ATPPGTTDPF PDSNAPIHDL QDEIPDRAWS SGYEWITEYA 
1861:	GKTVWFVASV KMGNEIAMCL QRAGKKVIQL NRKSYDTEYP KCKNGDWDFV ITTDISEMGA 
1921:	NFGASRVIDC RKSVKPTILE EGEGRVILGN PSPITSASAA QRRGRVGRNP NQVGDEYHYG 
1981:	GATSEDDSNL AHWTEAKIML DNIHMPNGLV AQLYGPEREK AFTMDGEYRL RGEEKKNFLE 
2041:	LLRTADLPVW LAYKVASNGI QYTDRKWCFD GPRTNAILED NTEVEIVTRM GERKILKPRW 
2101:	LDARVYADHQ ALKWFKDFAA GKRSAVSFIE VLGRMPEHFM GKTREALDTM YLVATAEKGG 
2161:	KAHRMALEEL PDALETITLI VAITVMTGGF FLLMMQRKGI GKMGLGALVL TLATFFLWAA 
2221:	EVPGTKIAGT LLIALLLMVV LIPEPEKQRS QTDNQLAVFL ICVLTVVGVV AANEYGMLEK 
2281:	TKADLKSMFG GKTQASGLTG LPSMALDLRP ATAWALYGGS TVVLTPLLKH LITSEYVTTS 
2341:	LASINSQAGS LFVLPRGVPF TDLDLTVGLV FLGCWGQITL TTFLTAMVLA TLHYGYMLPG 
2401:	WQAEALRAAQ RRTAAGIMKN AVVDGMVATD VPELERTTPL MQKKVGQVLL IGVSVAALLV 
2461:	NPNVTTVREA GVLVTAATLT LWDNGASAVW NSTTATGLCH VMRGSYLAGG SIAWTLIKNA 
2521:	DKPSLKRGRP GGRTLGEQWK EKLNAMSREE FFKYRREAII EVDRTEARRA RRENNIVGGH 
2581:	PVSRGSAKLR WLVEKGFVSP IGKVIDLGCG RGGWSYYAAT LKKVQEVRGY TKGGAGHEEP 
2641:	MLMQSYGWNL VSLKSGVDVF YKPSEPSDTL FCDIGESSPS PEVEEQRTLR VLEMTSDWLH 
2701:	RGPREFCIKV LCPYMPKVIE KMEVLQRRFG GGLVRLPLSR NSNHEMYWVS GAAGNVVHAV 
2761:	NMTSQVLLGR MDRTVWRGPK YEEDVNLGSG TRAVGKGEVH SNQEKIKKRI QKLKEEFATT 
2821:	WHKDPEHPYR TWTYHGSYEV KATGSASSLV NGVVKLMSKP WDAISYVTTM PMTDTTPFGQ 
2881:	QRVFKEKVDT KAPEPPAGAK EVLNETTNWL WAYLSREKRP RLCTKEEFIK KVNSNAALGA 
2941:	VFAEQNQWST AREAVDDPRF WEMVDEEREN HLRGECHTCI YNMMGKREKK PGEFGKAKGS 
3001:	RAIWFMWLGA RYLEFEALGF LNEDHWLSRE NSGGGVEGLG VQKLGYILRD IAGKQGGKMY 
3061:	ADDTAGWDTR ITRTDLENEA KVLELLDGEH RMLARAIIEL TYRHKVVKVM RPAAEGKTVM 
3121:	DVISREDQRG SGQVVTYALN TFTNIAVQLV RLMEAEGVIG PQHLEQLPRK NKIAVRTWLF 
3181:	ENGEERVTRM AISGDDCVVK PLDDRFATAL HFLNAMSKVR KDIQEWKPSH GWHDWQQVPF 
3241:	CSNHFQEIVM KDGRSIVVPC RGQDELIGRA RISPGAGWNV MDTACLAKAY AQMWLLLYFH 
3301:	RRDLRLMANX ICSXVPVDWV PTGRTSWSIH SKGEWMTTED MLQVWNRVWI EENEWMMDMT 
3361:	PITSWTDVPX VGKREDIWCG SLIGTRSRAT WAENIYAAIN QVRAVIGKEN YVDYMTSLRR 
3421:	YEDVLIQEDR VI