TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.H.2.1.3
Claudin-like septate junction protein of 290 aas and 4 TMSs.

Accession Number:G7YD61
Protein Name:Claudin-like protein septate junction protein
Length:290
Molecular Weight:33263.00
Species:Clonorchis sinensis (Chinese liver fluke) [79923]
Number of TMSs:4
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MQPFKEKSHR LFLVFLWTTI AAVTTNFISF VSPFWIQSVP EAHSQFERIG LWTACFNGYM 
61:	RPDDFSKAYF GCYYIYFVEY DRIRQWINPL WLYAIQVLSS LGILLQSLVT FTVLCQVTHS 
121:	VNRDDLSVVK FNLLGHFFTC VTLAASLVAF AIARYDSTWM PYPSLNVLSW AYATAVLSFV 
181:	LTLVAFIAGF LRYMYLDAMA QFEVNQALLE NQDEMGISSP PLKTGLSPSE RLDNELYSDE 
241:	MDRDDVEEQL DEDASGRPAS EHTRWSRYTP GGYDQHNPTH VASTPSYLNT