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2.A.1.1.103
D-xylose-proton symporter-like 3, chloroplastic

Accession Number:Q0WWW9
Protein Name:D-xylose-proton symporter-like 3, chloroplastic
Length:558
Molecular Weight:59829.00
Species:Arabidopsis thaliana (Mouse-ear cress) [3702]
Number of TMSs:12
Location1 / Topology2 / Orientation3: Plastid1 / Multi-pass membrane protein2
Substrate Xylose

Cross database links:

Genevestigator: Q0WWW9
eggNOG: COG0477
HEGENOM: HOG000202868
Entrez Gene ID: 836043   
Pfam: PF00083   
KEGG: ath:AT5G59250   

Gene Ontology

GO:0009941 C:chloroplast envelope
GO:0031969 C:chloroplast membrane
GO:0016021 C:integral to membrane
GO:0022891 F:substrate-specific transmembrane transporter activity
GO:0008643 P:carbohydrate transport

References (7)

[1] “Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence features of the regions of 1,081,958 bp covered by seventeen physically assigned P1 and TAC clones.”  Asamizu E.et.al.   10048488
[2] “Integral membrane proteins of the chloroplast envelope: identification and subcellular localization of new transporters.”  Ferro M.et.al.   12177442
[3] “Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis.”  Froehlich J.E.et.al.   12938931
[4] “Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana.”  Ferro M.et.al.   12766230
[5] “The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.”  Kleffmann T.et.al.   15028209
[6] “The monosaccharide transporter gene family in land plants is ancient and shows differential subfamily expression and expansion across lineages.”  Johnson D.A.et.al.   16923188
[7] “Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.”  Zybailov B.et.al.   18431481

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MAFAVSVQSH FAIRALKRDH FKNPSPRTFC SCFKSRPDSS YLSLKERTCF VSKPGLVTTR 
61:	YRHIFQVGAE TGGEFADSGE VADSLASDAP ESFSWSSVIL PFIFPALGGL LFGYDIGATS 
121:	GATLSLQSPA LSGTTWFNFS PVQLGLVVSG SLYGALLGSI SVYGVADFLG RRRELIIAAV 
181:	LYLLGSLITG CAPDLNILLV GRLLYGFGIG LAMHGAPLYI AETCPSQIRG TLISLKELFI 
241:	VLGILLGFSV GSFQIDVVGG WRYMYGFGTP VALLMGLGMW SLPASPRWLL LRAVQGKGQL 
301:	QEYKEKAMLA LSKLRGRPPG DKISEKLVDD AYLSVKTAYE DEKSGGNFLE VFQGPNLKAL 
361:	TIGGGLVLFQ QITGQPSVLY YAGSILQTAG FSAAADATRV SVIIGVFKLL MTWVAVAKVD 
421:	DLGRRPLLIG GVSGIALSLF LLSAYYKFLG GFPLVAVGAL LLYVGCYQIS FGPISWLMVS 
481:	EIFPLRTRGR GISLAVLTNF GSNAIVTFAF SPLKEFLGAE NLFLLFGGIA LVSLLFVILV 
541:	VPETKGLSLE EIESKILK