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2.A.1.15.11
The Vanillate porter, VanK 

Accession Number:Q6M372
Protein Name:Permease of the major facilitator superfamily
Length:446
Molecular Weight:46677.00
Species:Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) [196627]
Number of TMSs:12
Substrate Vanillate

Cross database links:

HEGENOM: HOG000114541
Entrez Gene ID: 1020335    3342695   
Pfam: PF07690   
KEGG: cgb:cg2618    cgl:NCgl2302   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0055085 P:transmembrane transport

References (1)

[1] “The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.”  Kalinowski J.et.al.   12948626

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MDIRQTINDT AMSRYQWFIV FIAVLLNALD GFDVLAMSFT ANAVTEEFGL SGSQLGVLLS 
61:	SALFGMTAGS LLFGPIGDRF GRKNALMIAL LFNVVGLVLS ATAQSAGQLG VWRLITGIGI 
121:	GGILACITVV ISEFSNNKNR GMAMSIYAAG YGIGASLGGF GAAQLIPTFG WRSVFAAGAI 
181:	ATGIATIATF FFLPESVDWL STRRPAGARD KINYIARRLG KVGTFELPGE QSLSTKKAGL 
241:	QSYAVLVNKE NRGTSIKLWV AFGIVMFGFY FANTWTPKLL VETGMSEQQG IIGGLMLSMG 
301:	GAFGSLLYGF LTTKFSSRNT LMTFMVLSGL TLILFISSTS VPSIAFASGV VVGMLINGCV 
361:	AGLYTLSPQL YSAEVRTTGV GAAIGMGRVG AISAPLLVGG LLDSGWSPTQ LYVGVAVIVI 
421:	AGATALIGMR TQAVAVEKQP EALATK