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2.A.1.3.18
Efflux pump for plant-bacterial signaling molecules, phytoalexins, flavonoids and salicylate as well as drugs, RmrB

Accession Number:Q9KIH3
Protein Name:RmrB
Length:527
Molecular Weight:56192.00
Species:Rhizobium etli [29449]
Number of TMSs:13
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate Signaling molecules, Phytoalexins, Flavonoids, Salicylate, drugs

Cross database links:

Pfam: PF07690   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0055085 P:transmembrane transport

References (1)

[1] “Multiresistance genes of Rhizobium etli CFN42.”  Gonzalez-Pasayo R.et.al.   10796024

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSTIAATAVA IAQPRASTRD WIAVLAGMIG AFMAILNIQI TNASLLDIEG GIGTGVDNGA 
61:	WISTSYLIGE IVVIPLTAYF SSVFSFRRYI LVNSILFPLF SMACAFAQDL GTMILLRGFR 
121:	AFAGGVLIPM AFTMVLTKLP KSQQPLGLAI FALSVTFAPA IGPTIGGYLT ENYGWQTIFF 
181:	INTAPSLIMA DALALTLDKQ PMQLHLLKEG DWAGIITMAI GLSALQTVLE EGNKDDWFSS 
241:	PFIVKLSIVA FVFLAAFIWI ELRVKKPLVK LRLLTQRNFG IGVLVNVLVG VALFGTVYIL 
301:	PQYLGQVQRY NAEQIGNVLA WTGLPKVLLI PLVPVLMKGF DARYIGFIGI SIFAISCFMN 
361:	IMLSADNAGD QFWIPNIVRA IGQALVLTPI TAITTAGIAP VDAAAASGLT NMLRNLGGAV 
421:	GTASLGTILT KREQFHSNII GQSITLTRDE VRDRLGKLSG YFIQHGVTDP AVASQKAIVA 
481:	LGQTVKRQAL IMGFSDTFAV IGVVLALAAI ALLLTKKPQA GAGAGAH