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2.A.1.66.3
UMF15 Homologue

Accession Number:B8BU21
Protein Name:Putative uncharacterized protein
Length:509
Molecular Weight:54685.00
Species:Thalassiosira pseudonana (Marine diatom) [35128]
Number of TMSs:12
Substrate Unknown

Cross database links:

Entrez Gene ID: 7450208   
Pfam: PF07690   
KEGG: tps:THAPSDRAFT_   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0055085 P:transmembrane transport

References (1)

[1] “The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.”  Armbrust E.V.et.al.   15459382

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MEDKVIIHSI EEFDCVGDIP VNVSSQSSQL SIGSQPTHHS TEYDASSTEA TLPPVAISTA 
61:	TNKPSERGES SAQKWRRRRV VLLYLITITI LFSDMNLMAP NLSTIADEFG FDEDECDIKL 
121:	GGLVALGFFF VGAPASFLIG WLADSINRSP LFAATVFIGE FGCLLVYFVQ TYPQLYACRV 
181:	LTGISIGGAI PIVFSVLGDL YPANQRAAIA AIVTTGTGLG TGIGQVIAGS LSSWRLPFLV 
241:	VSVPGMICSM LLLFVRDPKR GANEAAVIEL TNEKRNKKYV SCKSTCELLK IRSVLLIILQ 
301:	AAPGSLPFGF CATFLNDFLQ QQRGMTKQEA TGILLTFGAG NAIGVIAGGV LGHISYKRDV 
361:	RGPALIMGTS LILGCIPFYF LINTVTDEVS VGAAVAVMGG ILVVIPVPLE RSILTNICEP 
421:	QSRGRANALV SIVDDLGKGL GPALISLLIT TFDRQTAFNI SLIGWIIGGC LSLAIALFVV 
481:	KDEQSVQQKL RDKIANNDIE WQLEEPKFR