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2.A.1.71.2
The UMF19a porter

Accession Number:Q93J85
Protein Name:Putative drug efflux protein
Length:416
Molecular Weight:42890.00
Species:Streptomyces coelicolor [1902]
Number of TMSs:12
Substrate Unknown

Cross database links:

HEGENOM: HBG670095
Entrez Gene ID: 1098246   
Pfam: PF07690   
KEGG: sco:SCO2812   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005215 F:transporter activity
GO:0055085 P:transmembrane transport

References (1)

[1] “Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).”  Bentley S.D.et.al.   12000953

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MRELSQGRRP QSWSYPALLV LLMLGQATSA IPSPLYSLYA EKWDYPPVLT TVVFAAYGAV 
61:	AVVAILLSGA LSDRYGRRPV LLVAVLLLLA GLAVFVFAAG PAYLVVARML NGLGIGAIVV 
121:	VGGAALLDVR PERAARSGTL TAIAFNIGIA AAALGTAALA QTGFHPLLLP YLTDALIGLV 
181:	LLVLLLVMRE PHPSPGTATV GIPRPHVPKE MRGRFTFSVL GAGAAWAVLG VCFSLEPSIA 
241:	ADAANVDGPF FGGVVIAAVT LAAACTQILS ARRPARTVAL VGDTALAVLM LAGVGAFATG 
301:	NAVVIVVAVA LQGGAYGLAF GGSLRHLTAG IPAERRGAVM SMFYLLAYGA LVTPTLLVGV 
361:	GATVWADTTV FFVFSVLTAL LCFSAVVVER VRERRRRPAE AVPAPGTDVR EASTAD