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2.A.102.4.1
Orf of 253aas and 8 TMSs

Accession Number:Q9UYH7
Protein Name:Predicted permease aka PYRAB15300 aka PAB1010
Length:253
Molecular Weight:26947.00
Species:Pyrococcus abyssi [29292]
Number of TMSs:7
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

HEGENOM: HBG645429 HBG645429
RefSeq: NP_127205.1   
Entrez Gene ID: 1495813   
Pfam: PF01925   
BioCyc: PABY272844:PAB1010-MONOMER   
KEGG: pab:PAB1010    pab:PAB1010   

Gene Ontology

GO:0016021 C:integral to membrane

References (2)

[1] “An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi.”  Cohen G.N.et.al.   12622808
[2] “An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi.”  Cohen G.N.et.al.   12622808

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MIDTAILLKA FVTGVVTGTL AAMFGLGGGF LLVPILNLMG VEIHHAVGTS SASIIFTALS 
61:	SSYAYHRQKR ILYRVGILLA STAVVGAYLG AWMTSFISPG KLKVIFGVTL IFVAYRMFRG 
121:	KRGERREEIS VNEKLVPIGG FFSGIASGLL GVGGGIINVP LLTWLGVPIH YAVATSSFAI 
181:	VFTSTSSAIK HYFLGNVELY WLPLLVPGLI IGAQIGARIA KRTKASSLRK GFAVVMLILA 
241:	IRMILKGLGY SVP