TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


2.A.106.1.5
Chloroplast thylakoid GDT-1-like protein or photosynthesis-affected protein-71, PAM71 of 370 aas. Takes up Mn2+ and influences both Mn2+ and Ca2+ homeostasis in the chloroplast.  Necessary for photosystem II function due to its Mn2+ uptake activity (Schneider et al. 2016; Hoecker et al. 2017).

Accession Number:Q94AX5
Protein Name:GDT1-like protein 1, chloroplastic
Length:370
Molecular Weight:39074.00
Species:Arabidopsis thaliana (Mouse-ear cress) [3702]
Number of TMSs:7
Location1 / Topology2 / Orientation3: Plastid1 / Multi-pass membrane protein2
Substrate Manganese 2+

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MLSLNLSESL RIPFQNPRPP KSDFSSTSSS PSSSSRRCVS AYPIPIGFSV RNQYFSRCLT 
61:	QLRRNESQQL GFRCFQRNDA ACYLEKAESE EHDRNLDVLV ESSIAHSRRE IQRVLMFLAV 
121:	SGSVALLGTD PAFAASSIPN VTQSLVTSFG DLGDISSGFA SAFLLIFFSE LGDKTFFIAA 
181:	LLAARNSAAT VFVGTFGALG IMTIISVVLG RTFHYVDEVL PFRFGGTDLP IDDIAAVCLL 
241:	VYFGVSTLLD AVSDEGKADE EQKEAELAVS ELSGNGAGIV AAANTIISTF ALVFVAEWGD 
301:	KSFFSTIALA AASSPLGVIA GALAGHGAAT LLAVLGGSLL GNFLSEKAIA YVGGVLFLVF 
361:	AAVTVAEIVT