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2.A.106.2.1
The PFT27 protein

Accession Number:P52875
Protein Name:PF27 aka PFT27 aka TPARL
Length:323
Molecular Weight:34791.00
Species:Mus musculus (Mouse) [10090]
Number of TMSs:5
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

Genevestigator: P52875
eggNOG: roNOG09438
HEGENOM: HBG489944
RefSeq: NP_035756.2   
Entrez Gene ID: 21982   
Pfam: PF01169   
KEGG: mmu:21982   

Gene Ontology

GO:0016021 C:integral to membrane

References (2)

[1] “Messenger RNA expressed in mouse teratocarcinoma stem cells and down-regulated by a tumor-promoting phorbol ester codes for a novel transmembrane protein.”  Akagi J.et.al.   3202867
[2] “The mouse Clock locus: sequence and comparative analysis of 204 kb from mouse chromosome 5.”  Wilsbacher L.D.et.al.   11116088

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MAAAARGSGR APTRRLLVLL LLQLLWAPAG VRAGPEEDLS HRNQEPPAPA QQLQPQPAAV 
61:	QGLEPARAEK GLTPVAPVHT NKEDAAAQTN LGFIHAFVAA ISVIIVSELG DKTFFIAAIM 
121:	AMRYNRLTVL AGAMLALALM TCLSVLFGYA TTVIPRVYTY YVSTALFAIF GIRMLREGLK 
181:	MSPDEGQEEL EEVQAELKKK DEEFQRTKLL NGPDVETGTS TAIPQKKWLH FISPIFVQAL 
241:	TLTFLAEWGD RSQLTTIVLA AREDPYGVAV GGTVGHCLCT GLAVIGGRMI AQKISVRTVT 
301:	IIGGIVFLAF AFSALFISPE SGF